Pákozdi, K., Antal, K., Miskei, M., Szabó, Z., Pócsi, I., Emri, T.: Aspergillus fumigatus és Aspergillus nidulans sodB géndeléciós mutánsainak oxidatív stresszre adott válaszának összehasonlító transzkriptomikai vizsgálata = Comparative transcriptomic analysis of the oxidative stress response of sodB gene deletion mutants of Aspergillus fumigatus and A. nidulans.
In: VII. Magyar Mikológiai Konferencia : Absztraktkötet. Szerk.:: Dima Bálint; Papp Viktor, MATE, Magyar Mikológiai Társaság, 2024, 26-27, 2024. ISBN: 9789636230982(pdf)

Vig, I., Benkő, Z., Gila, B., Palczert, Z., Jakab, Á., Nagy, F., Miskei, M., Lee, M., Yu, J., Pócsi, I., Emri, T.: Functional characterization of genes encoding cadmium pumping P1B-type ATPases in Aspergillus fumigatus and Aspergillus nidulans.
Microbiol Spectr. 11 (5), 1-14, 2023.

Pócsi, I., Pákozdi, K., Miskei, M., Benkő, Z., Papp, L., Pusztahelyi, T., Virág, E.: Recent results in Fusarium verticillioides research at the University of Debrecen.
In: 7th International Conference on Emerging Trends and Innovations in Biotechnology BIOSPECTRUM 2023: Souvenir and Abstracts, School of Biosciences, Mar Athanasios College For Advanced Studies Tiruvalla (MACFAST), Tiruvalla, Kerala, India, 19, 2023.

Bodnár, V., Király, A., Orosz, E., Miskei, M., Emri, T., Karányi, Z., Leiter, É., De Vries, R., Pócsi, I.: Species-specific effects of the introduction of Aspergillus nidulans gfdB in osmophilic aspergilli.
Appl. Microbiol. Biotechnol. 107 ((2023),), 2423-2436, 2023.

Karányi, Z., Mosolygó, Á., Feró, O., Horváth, A., Boros-Oláh, B., Nagy, É., Hetey, S., Holb, I., Szaker, H., Miskei, M., Csorba, T., Székvölgyi, L.: NODULIN HOMEOBOX is required for heterochromatin homeostasis in Arabidopsis.
Nat Comms. 13 1-20, 2022.

Miskei, M., Horváth, A., Viola, L., Varga, L., Nagy, É., Feró, O., Karányi, Z., Roszik, J., Miskey, C., Ivics, Z., Székvölgyi, L.: Genome-wide mapping of binding sites of the transposase-derived SETMAR protein in the human genome.
Computational and Structural Biotechnology Journal. 19 4032-4041, 2021.

Szabó, K., Miskei, M., Farkas, I., Dombrádi, V.: The phosphatome of opportunistic pathogen Candida species.
Fungal Biology Reviews. 35 40-51, 2021.

Szabó, Z., Hornyák, L., Miskei, M., Székvölgyi, L.: Two targets, one hit: new anticancer therapeutics to prevent tumorigenesis without cardiotoxicity.
Front. Pharmacol. 11 1-5, 2021.

Miskei, M., Horváth, A., Vendruscolo, M., Fuxreiter, M.: Sequence-Based Prediction of Fuzzy Protein Interactions.
J. Mol. Biol. 432 (7), 2289-2303, 2020.

Horváth, A., Miskei, M., Ambrus, V., Vendruscolo, M., Fuxreiter, M.: Sequence-based prediction of protein binding mode landscapes.
PLoS Comput. Biol. 16 (5), 1-19, 2020.

Selbmann, L., Benkő, Z., Coleine, C., de Hoog, S., Donati, C., Druzhinina, I., Emri, T., Ettinger, C., Gladfelter, A., Gorbushina, A., Grigoriev, I., Grube, M., Gunde-Cimerman, N., Karányi, Z., Kocsis, B., Kubressoian, T., Miklós, I., Miskei, M., Muggia, L., Northen, T., Novak-Babič, M., Pennacchio, C., Pfliegler, V., Pócsi, I., Prigione, V., Riquelme, M., Segata, N., Schumacher, J., Shelest, E., Sterflinger, K., Tesei, D., U'Ren, J., Varese, G., Vázquez-Campos, X., Vicente, V., Souza, E., Zalar, P., Walker, A., Stajich, J.: Shed Light in the DaRk LineagES of the Fungal Tree of Life-STRES.
Life (Basel). 10 (12), 1-13, 2020.

Emri, T., Antal, K., Riley, R., Karányi, Z., Miskei, M., Orosz, E., Baker, S., Wiebenga, A., De Vries, R., Pócsi, I.: Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance.
Stud. Mycol. 91 23-36, 2018.

De Vries, R., Riley, R., Wiebenga, A., Aguilar-Osorio, G., Amillis, S., Akemi Uchima, C., Anderluh, G., Asadollahi, M., Askin, M., Barry, K., Battaglia, E., Bayram, Ö., Benocci, T., Braus-Stromeyer, S., Caldana, C., Cánovas, D., Cerqueira, G., Chen, F., Chen, W., Choi, C., Clum, A., Corrêa dos, S., Lima Damásio, A., Diallinas, G., Emri, T., Fekete, E., Flipphi, M., Freyberg, S., Gallo,, A., Gournas, C., Habgood, R., Hainaut, M., Harispe, M., Henrissat, B., Hildén, K., Hope, R., Hossain, A., Karabika, E., Karaffa, L., Karányi, Z., Kraševec, N., Kuo, A., Kusch, H., LaButti, K., Lagendijk, E., Lapidus, A., Levasseur, A., Lindquist, E., Lipzen, A., Logrieco, A., MacCabe, A., Mäkelä, M., Malavazi, I., Melin, P., Meyer, V., Mielnichuk, N., Miskei, M., Molnár, Á., Mulé, G., Ngan, C., Orejas, M., Orosz, E., Ouedraogo, J., Overkamp, K., Park, H., Perrone, G., Piumi, F., Punt, P., Ram, A., Ramón, A., Rauscher, S., Record, E., Riaño-Pachón, D., Robert, V., Röhrig, J., Ruller, R., Salamov, A., Salih, N., Samson, R., Karaffa, E., Sanguinetti, M., Schütze, T., Sepčić, K., Shelest, E., Sherlock, G., Sophianopoulou, V., Squina, F., Sun, H., Susca, A., Todd, R., Tsang, A., Unkles, S., Wiele, N., Rossen-Uffink, D., Velasco de, C., Vesth, T., Visser, J., Yu, J., Zhou, M., Andersen, M., Archer, D., Baker, S., Benoit, I., Brakhage, A., Braus, G., Fischer, R., Frisvad, J., Goldman, G., Houbraken, J., Oakley, B., Pócsi, I., Scazzocchio, C., Seiboth, B., Kuyk, P., Wortman, J., Dyer, P., Grigoriev, I.: Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.
Genome Biol. 18 (28), 1-45, 2017.

Miskei, M., Antal, C., Fuxreiter, M.: FuzDB: database of fuzzy complexes, a tool to develop stochastic structure-function relationships for protein complexes and higher-order assemblies.
Nucleic Acids Res. 45 D228-D235, 2017.

Miskei, M., Gregus, A., Sharma, R., Duró, N., Zsólyomi, F., Fuxreiter, M.: Fuzziness enables context dependence of protein interactions.
FEBS Lett. 591 (17), 2682-2695, 2017.

Bakti, F., Király, A., Orosz, E., Miskei, M., Emri, T., Leiter, É., Pócsi, I.: Study on the glutathione metabolism of the filamentous fungus.
Acta Microbiol. Immunol. Hung. 64 (3), 255-272, 2017.

Zhang, L., Zhou, Z., Guo, Q., Fokkens, L., Miskei, M., Pócsi, I., Zhang, W., Chen, M., Wang, L., Sun, Y., Donzelli, B., Gibson, D., Nelson, D., Luo, J., Rep, M., Liu, H., Yang, S., Wang, J., Krasnoff, S., Xu, Y., Molnár, I., Lin, M.: Insights into Adaptations to a Near- Obligate Nematode Endoparasitic Lifestyle from the Finished Genome of Drechmeria coniospora.
Sci Rep. 6 23122, 2016.

Leiter, É., Bálint, M., Miskei, M., Orosz, E., Szabó, Z., Pócsi, I.: Stress tolerances of nullmutants of function-unknown genes encoding menadione stress-responsive proteins in Aspergillus nidulans.
J. Basic Microbiol. 56 (7), 827-833, 2016.

Duró, N., Miskei, M., Fuxreiter, M.: Fuzziness endows viral motif-mimicry.
Mol. Biosyst. 11 (10), 2821-2829, 2015.

Sharma, R., Ráduly, Z., Miskei, M., Fuxreiter, M.: Fuzzy complexes: specific binding without complete folding.
FEBS Lett. 589 (19), 2533-2542, 2015.

Pócsi, I., Miskei, M., Xu, Y., Lin, M., Molnár, I.: Sequencing and annotation of the genome of the nematophagous fungus Drechmeria coniospora reveals the arsenal of an endoparasitoid fungus for the invasion of its host organisms.
Acta Microbiol. Immunol. Hung. 62 (Supplement-1), 200, 2015.

Nagygyörgy, E., Kovács, B., Leiter, É., Miskei, M., Pócsi, I., Hornok, L., Ádám, A.: Toxicity of abiotic stressors to Fusarium species: Differences in hydrogen peroxide and fungicide tolerance.
Acta Microbiol. Immunol. Hung. 61 (2), 189-208, 2014.

Karányi, Z., Holb, I., Hornok, L., Pócsi, I., Miskei, M.: FSRD: fungal stress response database.
Database. 2013 [6], 2013.

Szilágyi, M., Miskei, M., Karányi, Z., Lenkey, B., Pócsi, I., Emri, T.: Transcriptome changes initiated by carbon starvation in Aspergillus nidulans.
Microbiology (Reading, Engl.). 159 (1), 176-190, 2013.

Leiter, É., Gonzalez, A., Erdei, É., Casado, C., Kovács, L., Ádám, C., Oláh, J., Miskei, M., Molnár, M., Farkas, I., Hamari, Z., Ariño, J., Pócsi, I., Dombrádi, V.: Protein phosphatase Z modulates oxidative stress response in fungi.
Fungal Genet. Biol. 49 (9), 708-716, 2012.