Tudóstér: Barta Endre publikációi

Gönczi, M., Teixeira, J., Barrera-Vilarmau, S., Mediani, L., Antoniani, F., Nagy, T., Fehér, K., Ráduly, Z., Ambrus, V., Tőzsér, J., Barta, E., Kövér, K., Csernoch, L., Carra, S., Fuxreiter, M.: Alternatively spliced exon regulates context-dependent MEF2D higher-order assembly during myogenesis.
Nat Comms. 14 1329, 2023.

Nyerges, G., Hegedűs, B., Ninausz, N., Fehér, P., Fekete, Z., Barta, E., Stéger, V.: Higiénikus pannonméh-fenntartási és nemesítési genetikai kutatások - pályázat.
Méhész Újság. 10 (1), 30-31, 2023.

Imre, G., Takács, B., Czipa, E., Drubi, A., Jaksa, G., Latinovics, D., Nagy, A., Karkas, R., Hudoba, L., Vásárhelyi, B., Pankotai-Bodó, G., Blastyák, A., Hegedűs, Z., Germán, P., Bálint, B., Ahmed Abdullah, K., Kopasz, A., Kovács, A., Nagy, L., Sükösd, F., Pintér, L., Rülicke, T., Barta, E., Nagy, I., Haracska, L., Mátés, L.: Prolonged activity of the transposase helper may raise safety concerns during DNA transposon-based gene therapy.
Molecular Therapy - Methods & Clinical Development. 29 145-159, 2023.

Szűcs, Z., Pinti, É., Haltrich, I., Pálné, S., Nagy, T., Barta, E., Méhes, G., Bidiga, L., Török, O., Ujfalusi, A., Koczok, K., Balogh, I.: An Ultra-Rare Manifestation of an X-Linked Recessive Disorder: duchenne Muscular Dystrophy in a Female Patient.
Int. J. Mol. Sci. 23 (21), 1-15, 2022.

Laczik, M., Erdős, E., Ozgyin, L., Hevessy, Z., Csősz, É., Kalló, G., Nagy, T., Barta, E., Póliska, S., Szatmári, I., Bálint, B.: Extensive proteome and functional genomic profiling of variability between genetically identical human B-lymphoblastoid cells.
Sci Data. 9 (1), 1-12, 2022.

Krisztián, F., Szepesi, K., Bleier, N., Sugár, L., Kusza, S., Barta, E., Horn, P., Orosz, L., Stéger, V.: Genetic traces of dispersal and admixture in red deer (Cervus elaphus) populations from the Carpathian Basin.
Eur. J. Wildl. Res. 68 (5), 1-10, 2022.

Nagy, T., Csányi, E., Alnajjar, M., Fehér, P., Ninausz, N., Feró, O., Skage, M., Kollias, S., Fekete, Z., Kontra, L., Sándor, G., Heltai, M., Székvölgyi, L., Stéger, V., Barta, E.: The golden jackal (Canis aureus) reference genome assembly and annotation.
In: 3rd International Jackal Symposium 02-04. November 2022. Gödöllő, Hungary : Abstract Book. Ed.: Miklós Heltai, Hungarian University of Agriculture and Life Sciences, Institute for Wildlife Management and Nature Conservation, Gödöllő, 61, 2022.

Nyerges, G., Ninausz, N., Pásztor, A., Égerházi, B., Hegedűs, B., Barta, E., Stéger, V.: Higiénikus pannonméh-fenntartási és -nemesítési genetikai kutatások.
Méhész Újság. 8 (1), 22-23, 2021.

Czipa, E., Schiller, M., Nagy, T., Kontra, L., Steiner, L., Koller, J., Pálné, S., Barta, E.: ChIPSummitDB: a ChIP-seq based database of human transcription factor binding sites and the topological arrangements of the proteins bound to them.
Database. 2020 1-12, 2020.

Szemethy, D., Mihalik, B., Frank, K., Nagy, T., Újváry, D., Kusza, S., Szemethy, L., Barta, E., Stéger, V.: Development of Wild Boar Species-Specific DNA Markers for a Potential Quality Control and Traceability Method in Meat Products.
Food Anal. Methods. 2020 1-10, 2020.

Frank, K., Bana, N., Bleier, N., Sugár, L., Nagy, J., Wilhelm, J., Kálmán, Z., Barta, E., Orosz, L., Horn, P., Stéger, V.: Mining the red deer genome (CerEla1.0) to develop X-and Y-chromosome-linked STR markers.
PLoS One. 15 (11), 1-18, 2020.

Heltai, B., Szepesi, K., Frank, K., Fehér, P., Tokár, A., Mihalik, B., Bognár, G., Kolics-Horváth, É., Barta, E., Bodó, S., Kolics, B., Stéger, V.: Development of microsatellite markers related to the hygienic behaviour of honey bees.
In: Fiatal Biotechnológusok Országos Konferenciája. Szerk.: Tamás László, Zelenyánszki Helga, JATEPress, Szeged, 68, 2018.

Mihalik, B., Frank, K., Szemethy, D., Stéger, V., Barta, E., Kusza, S.: Genetic structure of the Hungarian wild boars (Sus scrofa) - initial results.
In: 12th International Symposium on Wild Boar and Other Suids : Book of Abstracts, Mendel University in Brno, Brno, 52, 2018. ISBN: 9788075095640

Mihalik, B., Frank, K., Barta, E., Stéger, V., Kusza, S.: M3 highway as a potential barrier of wild boar (Sus scrofa) in Hungary.
In: Modern Aspects of Sustainable Management of Game Populations : Book of Abstracts, [University of Forestry], [Sofia], 55, 2018.

Bana, N., Nyíri, A., Nagy, J., Frank, K., Nagy, T., Stéger, V., Schiller, M., Lakatos, P., Sugár, L., Horn, P., Barta, E., Orosz, L.: The red deer Cervus elaphus genome CerEla1.0: sequencing, annotating, genes, and chromosomes.
Mol. Genet. Genomics. 293 (3), 665-684, 2018.

Fehér, P., Frank, K., Heltai, B., Szepesi, K., Mihalik, B., Barta, E., Újváry, D., Gombkötő, P., Szemethy, L., Stéger, V.: Genetic monitoring of Hungarian carnivores: Felidae.
In: Hungarian Molecular Life Sciences : Book of Abstracts. Ed.: Zsuzsanna, Heiszler, Róbert Hohol, Nóra Éles-Etele, Diamond Congress Kft, Budapest, 249-250, 2017. ISBN: 9786155270345

Mihalik, B., Szemethy, D., Frank, K., Szepesi, K., Heltai, B., Fehér, P., Újváry, D., Szemethy, L., Barta, E., Stéger, V., Kusza, S.: Preliminary report on genetic structure of the Hungarian wild boars (Sus scrofa).
In: International Scientific Symposium "Bioengineering of Animal Resources 2017": Book of Abstracts. Ed.: M. Dragomirescu, N. Pacala, I. Pet, L. Stef, Banat's University of Agricultural Sciences and Veterinary Medicine, Temesvár, 1, 2017.

Nagy, T., Kis, A., Póliska, S., Barta, E., Havelda, Z., Marincs, F.: Comparison of small RNA next-generation sequencing with and without isolation of small RNA fraction.
Biotechniques. 60 (6), 273-278, 2016.

Szemethy, D., Frank, K., Szepesi, K., Mihalik, B., Újváry, D., Szemethy, L., Barta, E., Stéger, V.: Development of wild boar species-specific DNA markers.
In: 11th International Symposium on Wild Boar & Other Suids : Abstract booklet, [s. n.], Luxembourg, 51, 2016 .

Virág, E., Hegedűs, G., Barta, E., Nagy, E., Mátyás, K., Kolics, B., Taller, J.: Illumina Sequencing of Common (Short) Ragweed (Ambrosia artemisiifolia L.) Reproductive Organs and Leaves.
Front. Plant Sci. 7 1-3, 2016.

Nagy, G., Czipa, E., Steiner, L., Nagy, T., Pongor, S., Nagy, L., Barta, E.: Motif oriented high-resolution analysis of ChIP-seq data reveals the topological order of CTCF and cohesin proteins on DNA.
BMC Genomics. 17 (637), 1-9, 2016.

Német, Z., Albert, E., Nagy, T., Olasz, F., Barta, E., Kiss, J., Dán, Á., Bányai, K., Hermans, K., Biksi, I.: Draft Genome Sequence of a Highly Virulent Rabbit Staphylococcus aureus Strain.
Genome Announc. 3 (4), e00461-15, 2015.

Olasz, F., Nagy, T., Szabó, M., Kiss, J., Szmolka, A., Barta, E., Tonder, A., Thomson, N., Barrow, P., Nagy, B.: Genome Sequences of Three Salmonella enterica subsp. enterica Serovar Infantis Strains from Healthy Broiler Chicks in Hungary and in the United Kingdom.
Genome Announc. 3 (1), e01468-14, 2015.

Rácz, R., Bereczki, J., Sramkó, G., Kosztolányi, A., Tóth, J., Póliska, S., Horváth, A., Barta, E., Barta, Z.: Isolation and Characterisation of 15 Microsatellite Loci from Lethrus apterus (Coleoptera: Geotrupidae).
Ann. Zool. Fenn. 52 (1-2), 45-50, 2015.

Simándi, Z., Czipa, E., Horváth, A., Kőszeghy, Á., Bordás, C., Póliska, S., Juhász, I., Imre, L., Szabó, G., Dezső, B., Barta, E., Sauer, S., Károlyi, K., Kovács, I., Hutóczki, G., Bognár, L., Klekner, Á., Szűcs, P., Bálint, B., Nagy, L.: PRMT1 and PRMT8 regulate retinoic acid-dependent neuronal differentiation with implications to neuropathology.
Stem Cells. 33 (3), 726-741, 2015.

Molnár, J., Nagy, T., Stéger, V., Tóth, G., Marincs, F., Barta, E.: Genome sequencing and analysis of Mangalica, a fatty local pig of Hungary.
BMC Genomics. 15 (761), 1-12, 2014.

Dániel, B., Nagy, G., Hah, N., Horváth, A., Czimmerer, Z., Póliska, S., Gyuris, T., Keirsse, J., Gysemans, C., Van Ginderachter, J., Bálint, B., Evans, R., Barta, E., Nagy, L.: The active enhancer network operated by liganded RXR supports angiogenic activity in macrophages.
Genes Dev. 28 (14), 1562-1577, 2014.

Nagy, G., Dániel, B., Jonás, D., Nagy, L., Barta, E.: A novel method to predict regulatory regions based on histone mark landscapes in macrophages.
Immunobiology. 218 (11), 1416-1427, 2013.

Marincs, F., Molnár, J., Tóth, G., Stéger, V., Barta, E.: Introgression and isolation contributed to the development of Hungarian Mangalica pigs from a particular European ancient bloodline.
Genet. Sel. Evol. 45 (22), 1-6, 2013.

Nyikó, T., Kerényi, F., Szabadkai, L., Benkovics, A., Major, P., Sonkoly, B., Mérai, Z., Barta, E., Niemiec, E., Kufel, J., Silhavy, D.: Plant nonsense-mediated mRNA decay is controlled by different autoregulatory circuits and can be induced by an EJC-like complex.
Nucleic Acids Res. 41 (13), 6715-6728, 2013.

Király, R., Barta, E., Fésüs, L.: Polymorphism of transglutaminase 2: unusually low frequency of genomic variants with deficient functions.
Amino Acids. 44 (1), 215-225, 2013.

Barta, E.: Command line analysis of ChIP-seq results.
Embnet.journal. 17 (1), 13-17, 2011.

Stéger, V., Molnár, A., Borsy, A., Gyurján, I., Szabolcsi, Z., Dancs, G., Molnár, J., Papp, P., Nagy, J., Puskás, L., Barta, E., Zomborszky, Z., Horn, P., Podani, J., Semsey, S., Lakatos, P., Orosz, L.: Antler development and coupled osteoporosis in the skeleton of red deer cervus elaphus: expression dynamics for regulatory and effector genes.
Mol. Genet. Genomics. 284 (4), 273-287, 2010.

Nagy, A., Kénesi, E., Rentsendorj, O., Molnár, A., Szénási, T., Sinkó, I., Zvara, Á., Oommen, S., Barta, E., Puskás, L., Lefebvre, V., Kiss, I.: Evolutionarily Conserved, Growth Plate Zone-Specific Regulation of the Matrilin-1 Promoter: L-Sox5/Sox6 and Nfi Factors Bound near TATA Finely Tune Activation by Sox9.
Mol. Cell. Biol. 31 (4), 686-699, 2010.

del Val, C., Pelz, O., Glatting, K., Barta, E., Hotz-Wagenblatt, Á.: PromoterSweep: a tool for identification of transcription factor binding sites.
Theor. Chem. Acc. 125 (3-6), 583-591, 2010.

Szántó, A., Bálint, B., Nagy, Z., Barta, E., Dezső, B., Pap, A., Széles, L., Póliska, S., Oros, M., Evans, R., Barak, Y., Schwabe, J., Nagy, L.: STAT6 Transcription Factor Is a Facilitator of the Nuclear Receptor PPAR[gamma]-Regulated Gene Expression in Macrophages and Dendritic Cells.
Immunity. 3 (5), 699-712, 2010.

Sebestyén, E., Nagy, T., Suhai, S., Barta, E.: DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes.
BMC Bioinformatics. 10 (Suppl.6.), S6, 2009.

Kerényi, Z., Mérai, Z., Hiripi, L., Benkovics, A., Gyula, P., Lacomme, C., Barta, E., Nagy, F., Silhavy, D.: Inter-kingdom conservation of mechanism of nonsense-mediated mRNA decay.
Embo J. 27 (11), 1585-1595, 2008.

Barta, E.: Comparative Genomics-Based Orthologous Promoter Analysis using the DoOP database and the DoOPSearch web tool.
In: Comparative Genomics. Vol. I .. Szerk.: Bergman, N.H, Humana Press Inc, Totowa, 319-328, 2007. ISBN: 9781934115374

Szatmári, I., Töröcsik, D., Agostini, M., Nagy, T., Gurnell, M., Barta, E., Chatterjee, K., Nagy, L.: PPARgamma regulates the function of human dendritic cells primarily by altering lipid metabolism.
Blood. 110 (9), 3271-3279, 2007.

Kertesz, S., Kerényi, Z., Mérai, Z., Bartos, I., Pálfy, T., Barta, E., Silhavy, D.: Both introns and long 3'-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants.
Nucleic Acids Res. 34 (21), 6147-6157, 2006.

Szatmári, I., Vámosi, G., Brázda, P., Bálint, B., Benkő, S., Széles, L., Jeney, V., Özvegy-Laczka, C., Szántó, A., Barta, E., Balla, J., Sarkadi, B., Nagy, L.: Peroxisome proliferator-activated receptor gamma-regulated ABCG2 expression confers cytoprotection to human dendritic cells.
J. Biol. Chem. 281 (33), 23812-23823, 2006.

Tóth, G., Deák, G., Barta, E., Kiss, G.: PLOTREP: a web tool for defragmentation and visual analysis of dispersed genomic repeats.
Nucleic Acids Res. 34 (Web), 708-713, 2006.

Mérai, Z., Kerényi, Z., Molnár, A., Barta, E., Valóczi, A., Bisztray, G., Havelda, Z., Burgyan, J., Silhavy, D.: Aureusvirus P14 Is an Efficient RNA Silencing Suppressor That Binds Double-Stranded RNAs without Size Specificity.
J. Virol. 79 (11), 7217-7226, 2005.

Rentsendorj, O., Nagy, A., Sinkó, I., Daraba, A., Barta, E., Kiss, I.: Highly conserved proximal promoter element harbouring paired Sox9-binding sites contributes to the tissue- and developmental stage-specific activity of the matrilin-1 gene.
Biochem. J. 389 705-716, 2005.

Barta, E., Sebestyén, E., Pálfy, T., Tóth, G., Ortutay, C., Patthy, L.: DoOP: databases of Orthologous Promoters, collections of clusters of orthologous upstream sequences from chordates and plants.
Nucleic Acids Res. 33 (Database), 86-90, 2004.

Barta, E., Kaján, L., Pongor, S.: IS: a web-site for intron statistics.
Bioinformatics. 19 (4), 543, 2003.

Gerencsér, Á., Barta, E., Boa, S., Kastanis, P., Bősze, Z., Whitelaw, C.: Comparative analysis on the structural features of the 5' flankingregion of [kappa]-casein genes from six different species.
Genet. Sel. Evol. 34 (1), 117-128, 2002.

Barta, E., Pintar, A., Pongor, S.: Repeats with variations: accelerated evolution of the Pin2 family of proteinase inhibitors.
Trends Genet. 18 (12), 600-603, 2002.

Vlahovicek, K., Murvai, J., Barta, E., Pongor, S.: The SBASE protein domain library, releasr 9.0: an online resource for protein domain identification.
Nucleic Acids Res. 30 (1), 273-275, 2002.

Antcheva, N., Pintar, A., Patthy, A., Simoncsits, A., Barta, E., Tchorbanov, B., Pongor, S.: Proteins of circularly permuted sequence present within the same organism: The major serine proteinase inhibitor from Capsicum annuum seeds.
Protein Sci. 10 2280-2290, 2001.

Murvai, J., Vlahovicek, K., Barta, E., Pongor, S.: The SBASE protein domain library, release 8.0: a collection of annoted protein sequence segments.
Nucleic Acids Res. 29 (1), 58-60, 2001.

Murvai, J., Vlahovicek, K., Barta, E., Cataletto, B., Pongor, S.: The SBASE protein domain library, release 7.0: a collection of annoted protein sequence segments.
Nucleic Acids Res. 28 (1), 260-262, 2000.

Boldogkői, Z., Barta, E.: Specific amino acid content and codon usage account for the existence of overlapping ORFS.
Biosystems. 51 95-100, 1999.

Murvai, J., Vlahovicek, K., Barta, E., Parthasarathy, S., Hegyi, H., Pfeiffer, F., Pongor, S.: The domain-server: direct prediction of protein domain-homologies from BLAST search.
Bioinformatics. 15 (4), 343-344, 1999.

Murvai, J., Vlahovicek, K., Barta, E., Szepesvári, C., Acatrinei, C., Pongor, S.: The SBASE protein domain library, release 6.0: a collection of annoted protein sequence segments.
Nucleic Acids Res. 27 257-259, 1999.

Hutvágner, G., Barta, E., Bánfalvi, Z.: Isolation and sequence analysis of a cDNA and a related gene for cytochrome P450 proteins from Solanum chacoense.
Gene. 188 247-252, 1997.

Silhavy, D., Hutvágner, G., Barta, E., Bánfalvi, Z.: Isolation and characterization of a water-stress-inducible cDNA clone from Solanum chacoense.
Plant Mol.Biol. 27 587-595, 1995.

Bánfalvi, Z., Kostyál, Z., Barta, E.: Solanum brevidens possesses a non-sucrose-inducible patatin gene.
Mol. Gen. Genet. 245 517-522, 1994.

Barta, E., Deák, F., Kiss, I.: Evolution of the hyaluronan-binding module of link protein.
Biochem. J. 292 947-949, 1993.

Deák, F., Barta, E., Mestric, S., Biesold, M., Kiss, l.: Complex pattern of alternative splicing generates unusual diversity in the leader sequence of the chicken link protein mRNA.
Nucleic Acids Res. 19 (18), 4983-4990, 1991.

Kiss, I., Bősze, Z., Szabó, P., Altanchimeg, R., Barta, E., Deák, F.: Identification of Positive and Negative Regulatory Regions Controlling Expression of the Cartilage Matrix Protein Gene.
Mol. Cell. Biol. 10 (5), 2432-2436, 1990.