Tudóstér: Horváth Attila publikációi

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feltöltött közlemény: 31 Open Access: 22
2020
  1. Miskei, M., Horváth, A., Vendruscolo, M., Fuxreiter, M.: Sequence-Based Prediction of Fuzzy Protein Interactions.
    J. Mol. Biol. 432 (7), 2289-2303, 2020.
    Folyóirat-mutatók:
    D1 Biophysics
    Q1 Molecular Biology
    Q1 Structural Biology
  2. Horváth, A., Miskei, M., Ambrus, V., Vendruscolo, M., Fuxreiter, M.: Sequence-based prediction of protein binding mode landscapes.
    PLoS Comput. Biol. 16 (5), 1-19, 2020.
    Folyóirat-mutatók:
    Q1 Cellular and Molecular Neuroscience
    D1 Computational Theory and Mathematics
    D1 Ecology
    D1 Ecology, Evolution, Behavior and Systematics
    Q1 Genetics
    D1 Modeling and Simulation
    Q1 Molecular Biology
2019
  1. Ozgyin, L., Horváth, A., Hevessy, Z., Bálint, B.: Extensive epigenetic and transcriptomic variability between genetically identical human B-lymphoblastoid cells with implications in pharmacogenomics research.
    Sci Rep. 9 1-16, 2019.
    Folyóirat-mutatók:
    D1 Multidisciplinary
  2. Horváth, A., Dániel, B., Széles, L., Cuaranta-Monroy, I., Czimmerer, Z., Ozgyin, L., Steiner, L., Kiss, M., Simándi, Z., Póliska, S., Giannakis, N., Raineri, E., Gut, I., Nagy, B., Nagy, L.: Labelled regulatory elements are pervasive features of the macrophage genome and are dynamically utilized by classical and alternative polarization signals.
    Nucleic Acids Res. 47 (6), 2778-2792, 2019.
    Folyóirat-mutatók:
    D1 Genetics
2018
  1. Ivády, G., Madar, L., Dzsudzsák, E., Koczok, K., Kappelmayer, J., Krulisova, V., Macek, J., Horváth, A., Balogh, I.: Analytical parameters and validation of homopolymer detection in a pyrosequencing-based next generation sequencing system.
    BMC Genomics. 19 1-8, 2018.
    Folyóirat-mutatók:
    D1 Biotechnology
    Q1 Genetics
  2. Simándi, Z., Pájer, K., Károlyi, K., Sieler, T., Jiang, L., Kolostyák, Z., Sári, Z., Fekecs, Z., Pap, A., Patsalos, A., Contreras, G., Rehó, B., Papp, Z., Guo, X., Horváth, A., Kiss, G., Keresztessy, Z., Vámosi, G., Hickman, J., Xu, H., Dormann, D., Hortobágyi, T., Antal, M., Nógrádi, A., Nagy, L.: Arginine Methyltransferase PRMT8 Provides Cellular Stress Tolerance in Aging Motoneurons.
    J. Neurosci. 38 (35), 7683-7700, 2018.
    Folyóirat-mutatók:
    D1 Neuroscience (miscellaneous)
  3. Czimmerer, Z., Horváth, A., Dániel, B., Nagy, G., Cuaranta-Monroy, I., Kiss, M., Kolostyák, Z., Póliska, S., Steiner, L., Giannakis, N., Varga, T., Nagy, L.: Dynamic transcriptional control of macrophage miRNA signature via inflammation responsive enhancers revealed using a combination of next generation sequencing-based approaches.
    Biochim. Biophys. Acta. Gene Regul. Mech. 1861 (1), 14-28, 2018.
    Folyóirat-mutatók:
    D1 Biochemistry
    D1 Biophysics
    Q1 Genetics
    Q1 Molecular Biology
    Q1 Structural Biology
  4. Fejes, Z., Czimmerer, Z., Szűk, T., Póliska, S., Horváth, A., Balogh, E., Jeney, V., Váradi, J., Fenyvesi, F., Balla, G., Édes, I., Balla, J., Kappelmayer, J., Nagy, B.: Endothelial cell activation is attenuated by everolimus via transcriptional and post-transcriptional regulatory mechanisms after drug-eluting coronary stenting.
    PLoS One. 13 (6), 1-20, 2018.
    Folyóirat-mutatók:
    Q1 Agricultural and Biological Sciences (miscellaneous)
    Q1 Biochemistry, Genetics and Molecular Biology (miscellaneous)
    Q1 Medicine (miscellaneous)
  5. Czimmerer, Z., Nagy, Z., Nagy, G., Horváth, A., Silye-Cseh, T., Kriston, Á., Jonás, D., Sauer, S., Steiner, L., Dániel, B., Deleuze, J., Nagy, L.: Extensive and functional overlap of the STAT6 and RXR cistromes in the active enhancer repertoire of human CD14+ monocyte derived differentiating macrophages.
    Mol. Cell. Endocrinol. 471 63-74, 2018.
    Folyóirat-mutatók:
    Q1 Biochemistry
    Q1 Endocrinology
    Q2 Molecular Biology
  6. Ozgyin, L., Horváth, A., Bálint, B.: Lyophilized human cells stored at room temperature preserve multiple RNA species at excellent quality for RNA sequencing.
    Oncotarget. 9 (59), 31312-31329, 2018.
    Folyóirat-mutatók:
    Q1 Oncology
  7. Simándi, Z., Horváth, A., Cuaranta-Monroy, I., Sauer, S., Deleuze, J., Nagy, L.: RXR heterodimers orchestrate transcriptional control of neurogenesis and cell fate specification.
    Mol. Cell. Endocrinol. 471 51-62, 2018.
    Folyóirat-mutatók:
    Q1 Biochemistry
    Q1 Endocrinology
    Q2 Molecular Biology
  8. Dániel, B., Nagy, G., Horváth, A., Czimmerer, Z., Cuaranta-Monroy, I., Póliska, S., Hays, T., Sauer, S., Francois-Deleuze, J., Nagy, L.: The IL-4/STAT6/PPAR[gamma] signaling axis is driving the expansion of the RXR heterodimer cistrome, providing complex ligand responsiveness in macrophages.
    Nucleic Acids Res. 46 (9), 4425-4439, 2018.
    Folyóirat-mutatók:
    D1 Genetics
  9. Dániel, B., Nagy, G., Czimmerer, Z., Horváth, A., Hammers, D., Cuaranta-Monroy, I., Póliska, S., Tzerpos, P., Kolostyák, Z., Hays, T., Patsalos, A., Houtman, R., Sauer, S., Francois-Deleuze, J., Rastinejad, F., Bálint, B., Sweeney, H., Nagy, L.: The Nuclear Receptor PPAR[gamma] Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory.
    Immunity. 49 (4), 615-626, 2018.
    Folyóirat-mutatók:
    D1 Immunology
    D1 Immunology and Allergy
    D1 Infectious Diseases
  10. Czimmerer, Z., Dániel, B., Horváth, A., Rückerl, D., Nagy, G., Kiss, M., Peloquin, M., Budai, M., Cuaranta-Monroy, I., Simándi, Z., Steiner, L., Nagy, B., Póliska, S., Bankó, C., Bacsó, Z., Schulman, I., Sauer, S., Deleuze, J., Allen, J., Benkő, S., Nagy, L.: The Transcription Factor STAT6 Mediates Direct Repression of Inflammatory Enhancers and Limits Activation of Alternatively Polarized Macrophages.
    Immunity. 48 (1), 75-90, 2018.
    Folyóirat-mutatók:
    D1 Immunology
    D1 Immunology and Allergy
    D1 Infectious Diseases
2017
  1. Horváth, A., Simándi, Z., Nagy, L.: Commentaries on Viewpoint: Loopomics: a new functional approach to life.
    J. Appl. Physiol. 123 (4), 1014-1015, 2017.
  2. Gál, A., Balicza, P., Weaver, D., Naghdi, S., Joseph, S., Várnai, P., Gyuris, T., Horváth, A., Nagy, L., Seifert, E., Molnár, M., Hajnóczky, G.: MSTO1 is a cytoplasmic pro-mitochondrial fusion protein, whose mutation induces myopathy and ataxia in humans.
    EMBO Mol Med. 9 (7), 967-984, 2017.
    Folyóirat-mutatók:
    D1 Molecular Medicine
  3. Imre, L., Simándi, Z., Horváth, A., Fenyőfalvi, G., Nánási, P., Firouzi Niaki, E., Hegedűs, É., Bacsó, Z., Weyemi, U., Mauser, R., Ausio, J., Jeltsch, A., Bonner, W., Nagy, L., Kimura, H., Szabó, G.: Nucleosome stability measured in situ by automated quantitative imaging.
    Sci Rep. 7 (1), 1-15, 2017.
    Folyóirat-mutatók:
    D1 Multidisciplinary
  4. Kiss, M., Czimmerer, Z., Nagy, G., Bieniasz-Krzywiec, P., Ehling, M., Pap, A., Póliska, S., Botó, P., Tzerpos, P., Horváth, A., Kolostyák, Z., Dániel, B., Szatmári, I., Mazzone, M., Nagy, L.: Retinoid X receptor suppresses a metastasis-promoting transcriptional program in myeloid cells via a ligand-insensitive mechanism.
    Proc. Natl. Acad. Sci. U. S. A. 114 (40), 10725-10730, 2017.
    Folyóirat-mutatók:
    D1 Multidisciplinary
2016
  1. Varga, T., Mounier, R., Horváth, A., Cuvellier, S., Dumont, F., Póliska, S., Ardjoune, H., Juban, G., Nagy, L., Chazaud, B.: Highly Dynamic Transcriptional Signature of Distinct Macrophage Subsets during Sterile Inflammation, Resolution, and Tissue Repair.
    J. Immunol. 196 (11), 4771-4782, 2016.
    Folyóirat-mutatók:
    D1 Immunology
  2. Varga, T., Mounier, R., Patsalos, A., Gogolák, P., Peloquin, M., Horváth, A., Pap, A., Dániel, B., Nagy, G., Pintye, É., Póliska, S., Cuvellier, S., Ben Larbi, S., Sansbury, B., Spite, M., Brown, C., Chazaud, B., Nagy, L.: Macrophage PPAR[gamma], a Lipid Activated Transcription Factor Controls the Growth Factor GDF3 and Skeletal Muscle Regeneration.
    Immunity. 45 (5), 1038-1051, 2016.
    Folyóirat-mutatók:
    D1 Immunology
    D1 Immunology and Allergy
    D1 Infectious Diseases
  3. Simándi, Z., Horváth, A., Wright, L., Cuaranta-Monroy, I., De, L., Károlyi, K., Sauer, S., Deleuze, J., Gudas, L., Cowley, S., Nagy, L.: OCT4 Acts as an Integrator of Pluripotency and Signal-Induced Differentiation.
    Mol. Cell. 63 (4), 647-661, 2016.
    Folyóirat-mutatók:
    D1 Cell Biology
    D1 Molecular Biology
  4. Simándi, Z., Horváth, A., Nagy, P., Nagy, L.: Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation.
    JoVE. 2016 (112), e53978, 2016.
    Folyóirat-mutatók:
    Q2 Biochemistry, Genetics and Molecular Biology (miscellaneous)
    Q1 Chemical Engineering (miscellaneous)
    Q2 Immunology and Microbiology (miscellaneous)
    Q3 Neuroscience (miscellaneous)
  5. Czimmerer, Z., Varga, T., Kiss, M., Vázquez, C., Doan-Xuan, Q., Rückerl, D., Tattikota, S., Yan, X., Nagy, Z., Dániel, B., Póliska, S., Horváth, A., Nagy, G., Varallyay, É., Poy, M., Allen, J., Bacsó, Z., Abreu-Goodger, C., Nagy, L.: The IL-4/STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3p.
    Genome Med. 8 (1), 1-22, 2016.
    Folyóirat-mutatók:
    D1 Genetics
    D1 Genetics (clinical)
    D1 Molecular Biology
    D1 Molecular Medicine
2015
  1. Rácz, R., Bereczki, J., Sramkó, G., Kosztolányi, A., Tóth, J., Póliska, S., Horváth, A., Barta, E., Barta, Z.: Isolation and Characterisation of 15 Microsatellite Loci from Lethrus apterus (Coleoptera: Geotrupidae).
    Ann. Zool. Fenn. 52 (1-2), 45-50, 2015.
    Folyóirat-mutatók:
    Q2 Animal Science and Zoology
    Q2 Ecology
    Q3 Ecology, Evolution, Behavior and Systematics
    Q2 Nature and Landscape Conservation
  2. Simándi, Z., Czipa, E., Horváth, A., Kőszeghy, Á., Bordás, C., Póliska, S., Juhász, I., Imre, L., Szabó, G., Dezső, B., Barta, E., Sauer, S., Károlyi, K., Kovács, I., Hutóczki, G., Bognár, L., Klekner, Á., Szűcs, P., Bálint, B., Nagy, L.: PRMT1 and PRMT8 regulate retinoic acid-dependent neuronal differentiation with implications to neuropathology.
    Stem Cells. 33 (3), 726-741, 2015.
    Folyóirat-mutatók:
    Q1 Cell Biology
    Q1 Developmental Biology
    D1 Medicine (miscellaneous)
    D1 Molecular Medicine
2014
  1. Cuaranta-Monroy, I., Simándi, Z., Kolostyák, Z., Doan-Xuan, Q., Póliska, S., Horváth, A., Nagy, G., Bacsó, Z., Nagy, L.: Highly efficient differentiation of embryonic stem cells into adipocytes by ascorbic acid.
    Stem Cell Res. 13 (1), 88-97, 2014.
    Folyóirat-mutatók:
    Q2 Cell Biology
    Q2 Developmental Biology
    D1 Medicine (miscellaneous)
  2. Gyöngyösi, A., Dócs, O., Czimmerer, Z., Orosz, L., Horváth, A., Török, O., Méhes, G., Nagy, L., Bálint, B.: Measuring expression levels of small regulatory RNA molecules from body fluids and formalin-fixed, paraffin-embedded samples.
    In: RNA Mapping : Methods and Protocols . Ed.: M. Lucrecia Alvarez, Mahtab Nourbakhsh, Humana Press, New York, 105-119, 2014. ISBN: 9781493910618(Print)9781493910625(Online)
  3. Dániel, B., Nagy, G., Hah, N., Horváth, A., Czimmerer, Z., Póliska, S., Gyuris, T., Keirsse, J., Gysemans, C., Van Ginderachter, J., Bálint, B., Evans, R., Barta, E., Nagy, L.: The active enhancer network operated by liganded RXR supports angiogenic activity in macrophages.
    Genes Dev. 28 (14), 1562-1577, 2014.
    Folyóirat-mutatók:
    D1 Developmental Biology
    D1 Genetics
2013
  1. Czimmerer, Z., Hulvely, J., Simándi, Z., Varallyay, É., Havelda, Z., Szabó, E., Varga, A., Dezső, B., Balogh, M., Horváth, A., Domokos, B., Török, Z., Nagy, L., Bálint, B.: A versatile method to design stem-loop primer-based quantitative PCR assays for detecting small regulatory RNA molecules.
    PLoS One. 8 (1), 1-10, 2013.
    Folyóirat-mutatók:
    D1 Agricultural and Biological Sciences (miscellaneous)
    Q1 Biochemistry, Genetics and Molecular Biology (miscellaneous)
    D1 Medicine (miscellaneous)
  2. Meskó, B., Póliska, S., Váncsa, A., Szekanecz, Z., Palatka, K., Holló, Z., Horváth, A., Steiner, L., Zahuczky, G., Podani, J., Nagy, L.: Peripheral blood derived gene panels predict response to infliximab in rheumatoid arthritis and Crohn's disease.
    Genome Med. 5 (6), 59-69, 2013.
    Folyóirat-mutatók:
    Q1 Genetics
    Q1 Genetics (clinical)
    Q2 Molecular Biology
    Q1 Molecular Medicine
2012
  1. Laczik, M., Tukacs, E., Uzonyi, B., Domokos, B., Doma, Z., Kiss, M., Horváth, A., Batta, Z., Maros-Szabó, Z., Török, Z.: Geno viewer, a SAM/BAM viewer tool.
    Bioinformation. 8 (2), 107-109, 2012.
feltöltött közlemény: 31 Open Access: 22
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A szolgáltatást nyújtja: DEENK