Flipphi, M., Márton, A., Bíró, V., Ág, N., Karaffa, E., Fekete, E., Karaffa, L.: Generation, Transfer, and Loss of Alternative Oxidase Paralogues in the Aspergillaceae Family.
J. Fungi. 9 (12), 1-18, 2023.

Flipphi, M., Márton, A., Bíró, V., Ág, N., Karaffa, E., Fekete, E., Karaffa, L.: Mutations in the Second Alternative Oxidase Gene: A New Approach to Group Aspergillus niger Strains.
J. Fungi. 9 (5), 1-17, 2023.

Fekete, E., Pénzes, F., Ág, N., Ág-Rácz, V., Karaffa, E., Scazzocchio, C., Flipphi, M., Karaffa, L.: Unique and Repeated Stwintrons (Spliceosomal Twin Introns) in the Hypoxylaceae.
J. Fungi. 8 (4), 1-23, 2022.

Fekete, E., Pénzes, F., Ág, N., Scazzocchio, C., Flipphi, M., Karaffa, L.: Internally Symmetrical Stwintrons and Related Canonical Introns in Hypoxylaceae Species.
J. Fungi. 7 1-21, 2021.

Ág, N., Kavalecz, N., Pénzes, F., Karaffa, L., Scazzocchio, C., Flipphi, M., Fekete, E.: Complex intron generation in the yeast genus Lipomyces.
Sci. Rep. 10 1-10, 2020.

Kavalecz, N., Ág, N., Karaffa, L., Scazzocchio, C., Flipphi, M., Fekete, E.: A spliceosomal twin intron (stwintron) participates in both exon skipping and evolutionary exon loss.
Sci. Rep. 9 (1), 1-11, 2019.

Molnár, Á., Németh, Z., Kolláth, I., Fekete, E., Flipphi, M., Ág, N., Soós, Á., Kovács, B., Karaffa, E., Kubicek, C., Karaffa, L.: High oxygen tension increases itaconic acid accumulation, glucose consumption, and the expression and activity of alternative oxidase in Aspergillus terreus.
Appl. Microbiol. Biotechnol. 102 (20), 8799-8808, 2018.

Kavalecz, N., Flipphi, M., Ág, N., Karaffa, L., Scazzocchio, C., Fekete, E.: The first instance of a lariat branch point motif-interrupted spliceosomal twin intron in Aspergilius nidulans.
In: VII. Interdiszciplináris Doktorandusz Konferencia 2018 absztraktkötet. Szerk.: Bódog Ferenc, Pécsi Tudományegyetem Doktorandusz Önkormányzat, Pécs, 73, 2018. ISBN: 9789634292104

Fekete, E., Flipphi, M., Ág, N., Kavalecz, N., Cerqueira, G., Scazzocchio, C., Karaffa, L.: A mechanism for a single nucleotide intron shift.
Nucleic Acids Res. 45 (15), 9085-9092, 2017.

Flipphi, M., Ág, N., Karaffa, L., Kavalecz, N., Cerqueira, G., Scazzocchio, C., Fekete, E.: Emergence and loss of spliceosomal twin introns.
Fungal Biol Biotechnol. 4 (1), 7, 2017.

Ág, N., Flipphi, M., Karaffa, L., Scazzocchio, C., Fekete, E.: Alternatively spliced, spliceosomal twin introns in Helminthosporium solani.
Fungal Genet. Biol. 85 7-13, 2015.

Flipphi, M., Fekete, E., Ág, N., Scazzocchio, C., Karaffa, L.: Spliceosome twin introns in fungal nuclear transcripts.
Fungal Genet. Biol. 57 48-57, 2013.