Publication list
2024
2023
Domokos, A.,
Varga, Z.,
Jambrovics, K.,
Caballero-Sánchez, N.,
Szabó, E.,
Nagy, G.,
Scholtz, B.,
Halász, L.,
Váradi, E.,
Bene, K.,
Türk-Mázló, A.,
Bácsi, A.,
Jeney, V.,
Szebeni, G.,
Nagy, L.,
Czimmerer, Z.:
The transcriptional control of the VEGFA-VEGFR1 (FLT1) axis in alternatively polarized murine and human macrophages.
Front. Immunol. 14 1-20, 2023.
Journal metrics:
Q1 Immunology
Q1 Immunology and Allergy
2022
Patsalos, A.,
Halász, L.,
Medina-Serpas, M.,
Berger, W.,
Dániel, B.,
Tzerpos, P.,
Kiss, M.,
Nagy, G.,
Fischer, C.,
Simándi, Z.,
Varga, T.,
Nagy, L.:
A growth factor-expressing macrophage subpopulation orchestrates regenerative inflammation via GDF-15.
J. Exp. Med. 219 (1), 1-38, 2022.
Journal metrics:
D1 Immunology
D1 Immunology and Allergy
D1 Medicine (miscellaneous)
Göczi, L.,
Csumita, M.,
Horváth, A.,
Nagy, G.,
Póliska, S.,
Pigni, M.,
Thelemann, C.,
Dániel, B.,
Mianesaz, H.,
Varga, T.,
Sen, K.,
Raghav, S.,
Schoggins, J.,
Nagy, L.,
Acha-Orbea, H.,
Meissner, F.,
Reith, W.,
Széles, L.:
A Multi-Omics Approach Reveals Features That Permit Robust and Widespread Regulation of IFN-Inducible Antiviral Effectors.
J. Immun. 209 (10), 1930-1941, 2022.
Journal metrics:
Q1 Immunology
Q1 Immunology and Allergy
2020
Fadel, L.,
Rehó, B.,
Volkó, J.,
Bojcsuk, D.,
Kolostyák, Z.,
Nagy, G.,
Müller, G.,
Simándi, Z.,
Hegedűs, É.,
Szabó, G.,
Tóth, K.,
Nagy, L.,
Vámosi, G.:
Agonist binding directs dynamic competition among nuclear receptors for heterodimerization with retinoid X receptor.
J. Biol. Chem. 295 (29), 10045-10061, 2020.
Journal metrics:
D1 Biochemistry
Q1 Cell Biology
Q1 Molecular Biology
Csumita, M.,
Csermely, A.,
Horváth, A.,
Nagy, G.,
Monori, F.,
Göczi, L.,
Orbea, H.,
Reith, W.,
Széles, L.:
Specific enhancer selection by IRF3, IRF5 and IRF9 is determined by ISRE half-sites, 5' and 3' flanking bases, collaborating transcription factors and the chromatin environment in a combinatorial fashion.
Nucleic Acids Res. 48 (2), 589-604, 2020.
Dániel, B.,
Czimmerer, Z.,
Halász, L.,
Botó, P.,
Kolostyák, Z.,
Póliska, S.,
Berger, W.,
Tzerpos, P.,
Nagy, G.,
Horváth, A.,
Hajas, G.,
Silye-Cseh, T.,
Nagy, A.,
Sauer, S.,
Francois-Deleuze, J.,
Szatmári, I.,
Bácsi, A.,
Nagy, L.:
The transcription factor EGR2 is the molecular linchpin connecting STAT6 activation to the late, stable epigenomic program of alternative macrophage polarization.
Genes Dev. 34 (21-22), 1474-1492, 2020.
Journal metrics:
D1 Developmental Biology
D1 Genetics
2019
Patsalos, A.,
Tzerpos, P.,
Halász, L.,
Nagy, G.,
Pap, A.,
Giannakis, N.,
Lyroni, K.,
Koliaraki, V.,
Pintye, É.,
Dezső, B.,
Kollias, G.,
Spilianakis, C.,
Nagy, L.:
The BACH1-HMOX1 Regulatory Axis Is Indispensable for Proper Macrophage Subtype Specification and Skeletal Muscle Regeneration.
J. Immunol. 203 (6), 1532-1547, 2019.
Journal metrics:
Q1 Immunology
Q1 Immunology and Allergy
2018
Czimmerer, Z.,
Horváth, A.,
Dániel, B.,
Nagy, G.,
Cuaranta-Monroy, I.,
Kiss, M.,
Kolostyák, Z.,
Póliska, S.,
Steiner, L.,
Giannakis, N.,
Varga, T.,
Nagy, L.:
Dynamic transcriptional control of macrophage miRNA signature via inflammation responsive enhancers revealed using a combination of next generation sequencing-based approaches.
Biochim. Biophys. Acta. Gene Regul. Mech. 1861 (1), 14-28, 2018.
Journal metrics:
D1 Biochemistry
D1 Biophysics
Q1 Genetics
Q1 Molecular Biology
Q1 Structural Biology
Czimmerer, Z.,
Nagy, Z.,
Nagy, G.,
Horváth, A.,
Silye-Cseh, T.,
Kriston, Á.,
Jonás, D.,
Sauer, S.,
Steiner, L.,
Dániel, B.,
Deleuze, J.,
Nagy, L.:
Extensive and functional overlap of the STAT6 and RXR cistromes in the active enhancer repertoire of human CD14+ monocyte derived differentiating macrophages.
Mol. Cell. Endocrinol. 471 63-74, 2018.
Journal metrics:
Q1 Biochemistry
Q1 Endocrinology
Q2 Molecular Biology
Dániel, B.,
Nagy, G.,
Horváth, A.,
Czimmerer, Z.,
Cuaranta-Monroy, I.,
Póliska, S.,
Hays, T.,
Sauer, S.,
Francois-Deleuze, J.,
Nagy, L.:
The IL-4/STAT6/PPAR[gamma] signaling axis is driving the expansion of the RXR heterodimer cistrome, providing complex ligand responsiveness in macrophages.
Nucleic Acids Res. 46 (9), 4425-4439, 2018.
Dániel, B.,
Nagy, G.,
Czimmerer, Z.,
Horváth, A.,
Hammers, D.,
Cuaranta-Monroy, I.,
Póliska, S.,
Tzerpos, P.,
Kolostyák, Z.,
Hays, T.,
Patsalos, A.,
Houtman, R.,
Sauer, S.,
Francois-Deleuze, J.,
Rastinejad, F.,
Bálint, B.,
Sweeney, H.,
Nagy, L.:
The Nuclear Receptor PPAR[gamma] Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory.
Immunity. 49 (4), 615-626, 2018.
Journal metrics:
D1 Immunology
D1 Immunology and Allergy
D1 Infectious Diseases
Czimmerer, Z.,
Dániel, B.,
Horváth, A.,
Rückerl, D.,
Nagy, G.,
Kiss, M.,
Peloquin, M.,
Budai, M.,
Cuaranta-Monroy, I.,
Simándi, Z.,
Steiner, L.,
Nagy, B.,
Póliska, S.,
Bankó, C.,
Bacsó, Z.,
Schulman, I.,
Sauer, S.,
Deleuze, J.,
Allen, J.,
Benkő, S.,
Nagy, L.:
The Transcription Factor STAT6 Mediates Direct Repression of Inflammatory Enhancers and Limits Activation of Alternatively Polarized Macrophages.
Immunity. 48 (1), 75-90, 2018.
Journal metrics:
D1 Immunology
D1 Immunology and Allergy
D1 Infectious Diseases
2017
Kiss, M.,
Czimmerer, Z.,
Nagy, G.,
Bieniasz-Krzywiec, P.,
Ehling, M.,
Pap, A.,
Póliska, S.,
Botó, P.,
Tzerpos, P.,
Horváth, A.,
Kolostyák, Z.,
Dániel, B.,
Szatmári, I.,
Mazzone, M.,
Nagy, L.:
Retinoid X receptor suppresses a metastasis-promoting transcriptional program in myeloid cells via a ligand-insensitive mechanism.
Proc. Natl. Acad. Sci. U. S. A. 114 (40), 10725-10730, 2017.
2016
Varga, T.,
Mounier, R.,
Patsalos, A.,
Gogolák, P.,
Peloquin, M.,
Horváth, A.,
Pap, A.,
Dániel, B.,
Nagy, G.,
Pintye, É.,
Póliska, S.,
Cuvellier, S.,
Ben Larbi, S.,
Sansbury, B.,
Spite, M.,
Brown, C.,
Chazaud, B.,
Nagy, L.:
Macrophage PPAR[gamma], a Lipid Activated Transcription Factor Controls the Growth Factor GDF3 and Skeletal Muscle Regeneration.
Immunity. 45 (5), 1038-1051, 2016.
Journal metrics:
D1 Immunology
D1 Immunology and Allergy
D1 Infectious Diseases
Nagy, G.,
Czipa, E.,
Steiner, L.,
Nagy, T.,
Pongor, S.,
Nagy, L.,
Barta, E.:
Motif oriented high-resolution analysis of ChIP-seq data reveals the topological order of CTCF and cohesin proteins on DNA.
BMC Genomics. 17 (637), 1-9, 2016.
Journal metrics:
D1 Biotechnology
Q1 Genetics
Czimmerer, Z.,
Varga, T.,
Kiss, M.,
Vázquez, C.,
Doan-Xuan, Q.,
Rückerl, D.,
Tattikota, S.,
Yan, X.,
Nagy, Z.,
Dániel, B.,
Póliska, S.,
Horváth, A.,
Nagy, G.,
Varallyay, É.,
Poy, M.,
Allen, J.,
Bacsó, Z.,
Abreu-Goodger, C.,
Nagy, L.:
The IL-4/STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3p.
Genome Med. 8 (1), 1-22, 2016.
Journal metrics:
D1 Genetics
D1 Genetics (clinical)
D1 Molecular Biology
D1 Molecular Medicine
2014
Cuaranta-Monroy, I.,
Simándi, Z.,
Kolostyák, Z.,
Doan-Xuan, Q.,
Póliska, S.,
Horváth, A.,
Nagy, G.,
Bacsó, Z.,
Nagy, L.:
Highly efficient differentiation of embryonic stem cells into adipocytes by ascorbic acid.
Stem Cell Res. 13 (1), 88-97, 2014.
Journal metrics:
Q2 Cell Biology
Q2 Developmental Biology
D1 Medicine (miscellaneous)
Dániel, B.,
Nagy, G.,
Hah, N.,
Horváth, A.,
Czimmerer, Z.,
Póliska, S.,
Gyuris, T.,
Keirsse, J.,
Gysemans, C.,
Van Ginderachter, J.,
Bálint, B.,
Evans, R.,
Barta, E.,
Nagy, L.:
The active enhancer network operated by liganded RXR supports angiogenic activity in macrophages.
Genes Dev. 28 (14), 1562-1577, 2014.
Journal metrics:
D1 Developmental Biology
D1 Genetics
2013
Nagy, G.,
Dániel, B.,
Jonás, D.,
Nagy, L.,
Barta, E.:
A novel method to predict regulatory regions based on histone mark landscapes in macrophages.
Immunobiology. 218 (11), 1416-1427, 2013.
Journal metrics:
Q1 Hematology
Q2 Immunology
Q1 Immunology and Allergy
2024
2023
Domokos, A.,
Varga, Z.,
Jambrovics, K.,
Caballero-Sánchez, N.,
Szabó, E.,
Nagy, G.,
Scholtz, B.,
Halász, L.,
Váradi, E.,
Bene, K.,
Türk-Mázló, A.,
Bácsi, A.,
Jeney, V.,
Szebeni, G.,
Nagy, L.,
Czimmerer, Z.:
The transcriptional control of the VEGFA-VEGFR1 (FLT1) axis in alternatively polarized murine and human macrophages.
Front. Immunol. 14 1-20, 2023.
Journal metrics:
Q1 Immunology
Q1 Immunology and Allergy
2022
Patsalos, A.,
Halász, L.,
Medina-Serpas, M.,
Berger, W.,
Dániel, B.,
Tzerpos, P.,
Kiss, M.,
Nagy, G.,
Fischer, C.,
Simándi, Z.,
Varga, T.,
Nagy, L.:
A growth factor-expressing macrophage subpopulation orchestrates regenerative inflammation via GDF-15.
J. Exp. Med. 219 (1), 1-38, 2022.
Journal metrics:
D1 Immunology
D1 Immunology and Allergy
D1 Medicine (miscellaneous)
Göczi, L.,
Csumita, M.,
Horváth, A.,
Nagy, G.,
Póliska, S.,
Pigni, M.,
Thelemann, C.,
Dániel, B.,
Mianesaz, H.,
Varga, T.,
Sen, K.,
Raghav, S.,
Schoggins, J.,
Nagy, L.,
Acha-Orbea, H.,
Meissner, F.,
Reith, W.,
Széles, L.:
A Multi-Omics Approach Reveals Features That Permit Robust and Widespread Regulation of IFN-Inducible Antiviral Effectors.
J. Immun. 209 (10), 1930-1941, 2022.
Journal metrics:
Q1 Immunology
Q1 Immunology and Allergy
2020
Fadel, L.,
Rehó, B.,
Volkó, J.,
Bojcsuk, D.,
Kolostyák, Z.,
Nagy, G.,
Müller, G.,
Simándi, Z.,
Hegedűs, É.,
Szabó, G.,
Tóth, K.,
Nagy, L.,
Vámosi, G.:
Agonist binding directs dynamic competition among nuclear receptors for heterodimerization with retinoid X receptor.
J. Biol. Chem. 295 (29), 10045-10061, 2020.
Journal metrics:
D1 Biochemistry
Q1 Cell Biology
Q1 Molecular Biology
Csumita, M.,
Csermely, A.,
Horváth, A.,
Nagy, G.,
Monori, F.,
Göczi, L.,
Orbea, H.,
Reith, W.,
Széles, L.:
Specific enhancer selection by IRF3, IRF5 and IRF9 is determined by ISRE half-sites, 5' and 3' flanking bases, collaborating transcription factors and the chromatin environment in a combinatorial fashion.
Nucleic Acids Res. 48 (2), 589-604, 2020.
Dániel, B.,
Czimmerer, Z.,
Halász, L.,
Botó, P.,
Kolostyák, Z.,
Póliska, S.,
Berger, W.,
Tzerpos, P.,
Nagy, G.,
Horváth, A.,
Hajas, G.,
Silye-Cseh, T.,
Nagy, A.,
Sauer, S.,
Francois-Deleuze, J.,
Szatmári, I.,
Bácsi, A.,
Nagy, L.:
The transcription factor EGR2 is the molecular linchpin connecting STAT6 activation to the late, stable epigenomic program of alternative macrophage polarization.
Genes Dev. 34 (21-22), 1474-1492, 2020.
Journal metrics:
D1 Developmental Biology
D1 Genetics
2019
Patsalos, A.,
Tzerpos, P.,
Halász, L.,
Nagy, G.,
Pap, A.,
Giannakis, N.,
Lyroni, K.,
Koliaraki, V.,
Pintye, É.,
Dezső, B.,
Kollias, G.,
Spilianakis, C.,
Nagy, L.:
The BACH1-HMOX1 Regulatory Axis Is Indispensable for Proper Macrophage Subtype Specification and Skeletal Muscle Regeneration.
J. Immunol. 203 (6), 1532-1547, 2019.
Journal metrics:
Q1 Immunology
Q1 Immunology and Allergy
2018
Czimmerer, Z.,
Horváth, A.,
Dániel, B.,
Nagy, G.,
Cuaranta-Monroy, I.,
Kiss, M.,
Kolostyák, Z.,
Póliska, S.,
Steiner, L.,
Giannakis, N.,
Varga, T.,
Nagy, L.:
Dynamic transcriptional control of macrophage miRNA signature via inflammation responsive enhancers revealed using a combination of next generation sequencing-based approaches.
Biochim. Biophys. Acta. Gene Regul. Mech. 1861 (1), 14-28, 2018.
Journal metrics:
D1 Biochemistry
D1 Biophysics
Q1 Genetics
Q1 Molecular Biology
Q1 Structural Biology
Czimmerer, Z.,
Nagy, Z.,
Nagy, G.,
Horváth, A.,
Silye-Cseh, T.,
Kriston, Á.,
Jonás, D.,
Sauer, S.,
Steiner, L.,
Dániel, B.,
Deleuze, J.,
Nagy, L.:
Extensive and functional overlap of the STAT6 and RXR cistromes in the active enhancer repertoire of human CD14+ monocyte derived differentiating macrophages.
Mol. Cell. Endocrinol. 471 63-74, 2018.
Journal metrics:
Q1 Biochemistry
Q1 Endocrinology
Q2 Molecular Biology
Dániel, B.,
Nagy, G.,
Horváth, A.,
Czimmerer, Z.,
Cuaranta-Monroy, I.,
Póliska, S.,
Hays, T.,
Sauer, S.,
Francois-Deleuze, J.,
Nagy, L.:
The IL-4/STAT6/PPAR[gamma] signaling axis is driving the expansion of the RXR heterodimer cistrome, providing complex ligand responsiveness in macrophages.
Nucleic Acids Res. 46 (9), 4425-4439, 2018.
Dániel, B.,
Nagy, G.,
Czimmerer, Z.,
Horváth, A.,
Hammers, D.,
Cuaranta-Monroy, I.,
Póliska, S.,
Tzerpos, P.,
Kolostyák, Z.,
Hays, T.,
Patsalos, A.,
Houtman, R.,
Sauer, S.,
Francois-Deleuze, J.,
Rastinejad, F.,
Bálint, B.,
Sweeney, H.,
Nagy, L.:
The Nuclear Receptor PPAR[gamma] Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory.
Immunity. 49 (4), 615-626, 2018.
Journal metrics:
D1 Immunology
D1 Immunology and Allergy
D1 Infectious Diseases
Czimmerer, Z.,
Dániel, B.,
Horváth, A.,
Rückerl, D.,
Nagy, G.,
Kiss, M.,
Peloquin, M.,
Budai, M.,
Cuaranta-Monroy, I.,
Simándi, Z.,
Steiner, L.,
Nagy, B.,
Póliska, S.,
Bankó, C.,
Bacsó, Z.,
Schulman, I.,
Sauer, S.,
Deleuze, J.,
Allen, J.,
Benkő, S.,
Nagy, L.:
The Transcription Factor STAT6 Mediates Direct Repression of Inflammatory Enhancers and Limits Activation of Alternatively Polarized Macrophages.
Immunity. 48 (1), 75-90, 2018.
Journal metrics:
D1 Immunology
D1 Immunology and Allergy
D1 Infectious Diseases
2017
Kiss, M.,
Czimmerer, Z.,
Nagy, G.,
Bieniasz-Krzywiec, P.,
Ehling, M.,
Pap, A.,
Póliska, S.,
Botó, P.,
Tzerpos, P.,
Horváth, A.,
Kolostyák, Z.,
Dániel, B.,
Szatmári, I.,
Mazzone, M.,
Nagy, L.:
Retinoid X receptor suppresses a metastasis-promoting transcriptional program in myeloid cells via a ligand-insensitive mechanism.
Proc. Natl. Acad. Sci. U. S. A. 114 (40), 10725-10730, 2017.
2016
Varga, T.,
Mounier, R.,
Patsalos, A.,
Gogolák, P.,
Peloquin, M.,
Horváth, A.,
Pap, A.,
Dániel, B.,
Nagy, G.,
Pintye, É.,
Póliska, S.,
Cuvellier, S.,
Ben Larbi, S.,
Sansbury, B.,
Spite, M.,
Brown, C.,
Chazaud, B.,
Nagy, L.:
Macrophage PPAR[gamma], a Lipid Activated Transcription Factor Controls the Growth Factor GDF3 and Skeletal Muscle Regeneration.
Immunity. 45 (5), 1038-1051, 2016.
Journal metrics:
D1 Immunology
D1 Immunology and Allergy
D1 Infectious Diseases
Nagy, G.,
Czipa, E.,
Steiner, L.,
Nagy, T.,
Pongor, S.,
Nagy, L.,
Barta, E.:
Motif oriented high-resolution analysis of ChIP-seq data reveals the topological order of CTCF and cohesin proteins on DNA.
BMC Genomics. 17 (637), 1-9, 2016.
Journal metrics:
D1 Biotechnology
Q1 Genetics
Czimmerer, Z.,
Varga, T.,
Kiss, M.,
Vázquez, C.,
Doan-Xuan, Q.,
Rückerl, D.,
Tattikota, S.,
Yan, X.,
Nagy, Z.,
Dániel, B.,
Póliska, S.,
Horváth, A.,
Nagy, G.,
Varallyay, É.,
Poy, M.,
Allen, J.,
Bacsó, Z.,
Abreu-Goodger, C.,
Nagy, L.:
The IL-4/STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3p.
Genome Med. 8 (1), 1-22, 2016.
Journal metrics:
D1 Genetics
D1 Genetics (clinical)
D1 Molecular Biology
D1 Molecular Medicine
2014
Cuaranta-Monroy, I.,
Simándi, Z.,
Kolostyák, Z.,
Doan-Xuan, Q.,
Póliska, S.,
Horváth, A.,
Nagy, G.,
Bacsó, Z.,
Nagy, L.:
Highly efficient differentiation of embryonic stem cells into adipocytes by ascorbic acid.
Stem Cell Res. 13 (1), 88-97, 2014.
Journal metrics:
Q2 Cell Biology
Q2 Developmental Biology
D1 Medicine (miscellaneous)
Dániel, B.,
Nagy, G.,
Hah, N.,
Horváth, A.,
Czimmerer, Z.,
Póliska, S.,
Gyuris, T.,
Keirsse, J.,
Gysemans, C.,
Van Ginderachter, J.,
Bálint, B.,
Evans, R.,
Barta, E.,
Nagy, L.:
The active enhancer network operated by liganded RXR supports angiogenic activity in macrophages.
Genes Dev. 28 (14), 1562-1577, 2014.
Journal metrics:
D1 Developmental Biology
D1 Genetics
2013
Nagy, G.,
Dániel, B.,
Jonás, D.,
Nagy, L.,
Barta, E.:
A novel method to predict regulatory regions based on histone mark landscapes in macrophages.
Immunobiology. 218 (11), 1416-1427, 2013.
Journal metrics:
Q1 Hematology
Q2 Immunology
Q1 Immunology and Allergy
2010
Széles, L.,
Póliska, S.,
Nagy, G.,
Szatmári, I.,
Szántó, A.,
Pap, A.,
Lindstedt, M.,
Santegoets, S.,
Rühl, R.,
Dezső, B.,
Nagy, L.:
Research resource: transcriptome profiling of genes regulated by RXR and its permissive and nonpermissive partners in differentiating monocyte-derived dendritic cells.
Mol. Endocrinol. 24 (11), 2218-2231, 2010.
Journal metrics:
D1 Endocrinology
D1 Medicine (miscellaneous)
Q1 Molecular Biology
Show all
updated: 2024-09-01, 01:28
