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MTA-DE LENDÜLET Protein Dynamics Research Group

MTA-DE LENDÜLET Protein Dynamics Research Group

Name: MTA-DE LENDÜLET Protein Dynamics Research Group

Publication list

Uploaded publications:
29
Publications in DEA:
29
OA:
17
Date range:
2013-2020
2020
  1. Fuxreiter, M.: Classifying the Binding Modes of Disordered Proteins.
    Int. J. Mol. Sci. 21 (22), 1-9, 2020.
    Journal metrics:
    Q2 Catalysis
    D1 Computer Science Applications
    D1 Inorganic Chemistry
    Q1 Medicine (miscellaneous)
    Q2 Molecular Biology
    D1 Organic Chemistry
    D1 Physical and Theoretical Chemistry
    D1 Spectroscopy
  2. Fuxreiter, M.: Fuzzy protein theory for disordered proteins.
    Biochem. Soc. Trans. 48 (6), 2557-2564, 2020.
    Journal metrics:
    D1 Biochemistry
  3. Zsólyomi, F., Ambrus, V., Fuxreiter, M.: Patterns of Dynamics Comprise a Conserved Evolutionary Trait.
    J. Mol. Biol. 432 (2), 497-507, 2020.
    Journal metrics:
    D1 Biophysics
    Q1 Molecular Biology
    Q1 Structural Biology
  4. Kubatova, N., Pyper, D., Jonker, H., Saxena, K., Remmel, L., Richter, C., Brantl, S., Evguenieva-Hackenberg, E., Hess, W., Klug, G., Marchfelder, A., Soppa, J., Streit, W., Mayzel, M., Orekhov, V., Fuxreiter, M., Schmitz, R., Schwalbe, H.: Rapid Biophysical Characterization and NMR Spectroscopy Structural Analysis of Small Proteins from Bacteria and Archaea.
    ChemBioChem. 21 (8), 1178-1187, 2020.
    Journal metrics:
    Q2 Biochemistry
    Q2 Molecular Biology
    Q2 Molecular Medicine
    Q1 Organic Chemistry
  5. Miskei, M., Horváth, A., Vendruscolo, M., Fuxreiter, M.: Sequence-Based Prediction of Fuzzy Protein Interactions.
    J. Mol. Biol. 432 (7), 2289-2303, 2020.
    Journal metrics:
    D1 Biophysics
    Q1 Molecular Biology
    Q1 Structural Biology
  6. Horváth, A., Miskei, M., Ambrus, V., Vendruscolo, M., Fuxreiter, M.: Sequence-based prediction of protein binding mode landscapes.
    PLoS Comput. Biol. 16 (5), 1-19, 2020.
    Journal metrics:
    Q1 Cellular and Molecular Neuroscience
    D1 Computational Theory and Mathematics
    D1 Ecology
    D1 Ecology, Evolution, Behavior and Systematics
    Q1 Genetics
    D1 Modeling and Simulation
    Q1 Molecular Biology
  7. Bozóki, B., Mótyán, J., Hoffka, G., Waugh, D., Tőzsér, J.: Specificity Studies of the Venezuelan Equine Encephalitis Virus Non-Structural Protein 2 Protease Using Recombinant Fluorescent Substrates.
    Int. J. Mol. Sci. 21 (20), 1-26, 2020.
    Journal metrics:
    Q2 Catalysis
    D1 Computer Science Applications
    D1 Inorganic Chemistry
    Q1 Medicine (miscellaneous)
    Q2 Molecular Biology
    D1 Organic Chemistry
    D1 Physical and Theoretical Chemistry
    D1 Spectroscopy
  8. Hardenberg, M., Horváth, A., Ambrus, V., Fuxreiter, M., Vendruscolo, M.: Widespread occurrence of the droplet state of proteins in the human proteome.
    Proc. Natl. Acad. Sci. U. S. A. 117 (52), 33254-33262-, 2020.
    Journal metrics:
    D1 Multidisciplinary
2019
  1. Tüű-Szabó, B., Hoffka, G., Duró, N., Fuxreiter, M.: Altered dynamics may drift pathological fibrillization in membraneless organelles.
    Biochim. Biophys. Acta. Proteins Proteom. 1867 (10), 988-998, 2019.
    Journal metrics:
    Q1 Analytical Chemistry
    Q2 Biochemistry
    Q1 Biophysics
    Q2 Molecular Biology
  2. Fuxreiter, M.: Fold or not to fold upon binding - does it really matter?.
    Curr. Opin. Struct. Biol. 54 19-25, 2019.
    Journal metrics:
    D1 Molecular Biology
    D1 Structural Biology
  3. Sharma, R., Demény, M., Ambrus, V., Király, S., Kurtán, T., Gatti-Lafranconi, P., Fuxreiter, M.: Specific and fuzzy interactions cooperate in modulating protein half-life.
    J. Mol. Biol. 431 (8), 1700-1707, 2019.
    Journal metrics:
    D1 Biophysics
    D1 Molecular Biology
    Q1 Structural Biology
2018
  1. Emri, T., Antal, K., Riley, R., Karányi, Z., Miskei, M., Orosz, E., Baker, S., Wiebenga, A., De Vries, R., Pócsi, I.: Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance.
    Stud. Mycol. 91 23-36, 2018.
    Journal metrics:
    D1 Agricultural and Biological Sciences (miscellaneous)
    D1 Plant Science
  2. Troilo, F., Bignon, C., Gianni, S., Fuxreiter, M., Longhi, S.: Experimental Characterization of Fuzzy Protein Assemblies: Interactions of Paramyxoviral NTAIL Domains With Their Functional Partners.
    In: Intrinsically Disordered Proteins / edited by Elizabeth Rhoades, Academic Press, New York, 137-192, 2018, (Methods In Enzymology, ISSN 0076-6879 ; 611.) ISBN: 9780128156490
  3. Fuxreiter, M.: Fuzziness in Protein Interactions: a Historical Perspective.
    J. Mol. Biol. 430 (16), 2278-2287, 2018.
    Journal metrics:
    D1 Molecular Biology
    Q1 Structural Biology
  4. Tüű-Szabó, B., Kóczy, L., Fuxreiter, M.: Simulations of higher-order protein assemblies using a fuzzy framework.
    BioRxiv 2018 1-10, 2018.
  5. Tüű-Szabó, B., Kóczy, L., Fuxreiter, M.: Simulations of Higher-Order Protein Organizations Using a Fuzzy Framework.
    Complexity. 2018 1-11, 2018.
    Journal metrics:
    Q1 Multidisciplinary
  6. Fuxreiter, M.: Towards a Stochastic Paradigm: from Fuzzy Ensembles to Cellular Functions.
    Molecules. 23 (11), 1-10, 2018.
    Journal metrics:
    Q2 Analytical Chemistry
    Q1 Chemistry (miscellaneous)
    Q2 Drug Discovery
    Q2 Medicine (miscellaneous)
    Q3 Molecular Medicine
    Q2 Organic Chemistry
    Q1 Pharmaceutical Science
    Q2 Physical and Theoretical Chemistry
2017
  1. Hegyi, B., Horváth, B., Váczi, K., Gönczi, M., Kistamás, K., Ruzsnavszky, F., Veress, R., Izu, L., Chen-Izu, Y., Bányász, T., Magyar, J., Csernoch, L., Nánási, P., Szentandrássy, N.: Ca2+-activated Cl- current is antiarrhythmic by reducing both spatial and temporal heterogeneity of cardiac repolarization.
    J. Mol. Cell. Cardiol. 109 27-37, 2017.
    Journal metrics:
    D1 Cardiology and Cardiovascular Medicine
    Q1 Molecular Biology
  2. De Vries, R., Riley, R., Wiebenga, A., Aguilar-Osorio, G., Amillis, S., Akemi Uchima, C., Anderluh, G., Asadollahi, M., Askin, M., Barry, K., Battaglia, E., Bayram, Ö., Benocci, T., Braus-Stromeyer, S., Caldana, C., Cánovas, D., Cerqueira, G., Chen, F., Chen, W., Choi, C., Clum, A., Corrêa dos, S., Lima Damásio, A., Diallinas, G., Emri, T., Fekete, E., Flipphi, M., Freyberg, S., Gallo,, A., Gournas, C., Habgood, R., Hainaut, M., Harispe, M., Henrissat, B., Hildén, K., Hope, R., Hossain, A., Karabika, E., Karaffa, L., Karányi, Z., Kraševec, N., Kuo, A., Kusch, H., LaButti, K., Lagendijk, E., Lapidus, A., Levasseur, A., Lindquist, E., Lipzen, A., Logrieco, A., MacCabe, A., Mäkelä, M., Malavazi, I., Melin, P., Meyer, V., Mielnichuk, N., Miskei, M., Molnár, Á., Mulé, G., Ngan, C., Orejas, M., Orosz, E., Ouedraogo, J., Overkamp, K., Park, H., Perrone, G., Piumi, F., Punt, P., Ram, A., Ramón, A., Rauscher, S., Record, E., Riaño-Pachón, D., Robert, V., Röhrig, J., Ruller, R., Salamov, A., Salih, N., Samson, R., Karaffa, E., Sanguinetti, M., Schütze, T., Sepčić, K., Shelest, E., Sherlock, G., Sophianopoulou, V., Squina, F., Sun, H., Susca, A., Todd, R., Tsang, A., Unkles, S., Wiele, N., Rossen-Uffink, D., Velasco de, C., Vesth, T., Visser, J., Yu, J., Zhou, M., Andersen, M., Archer, D., Baker, S., Benoit, I., Brakhage, A., Braus, G., Fischer, R., Frisvad, J., Goldman, G., Houbraken, J., Oakley, B., Pócsi, I., Scazzocchio, C., Seiboth, B., Kuyk, P., Wortman, J., Dyer, P., Grigoriev, I.: Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.
    Genome Biol. 18 (28), 1-45, 2017.
    Journal metrics:
    D1 Cell Biology
    D1 Ecology, Evolution, Behavior and Systematics
    D1 Genetics
  3. Thangaraju, K., Király, R., Mótyán, J., Ambrus, V., Fuxreiter, M., Fésüs, L.: Computational analyses of the effect of novel amino acid clusters of human transglutaminase 2 on its structure and function.
    Amino Acids. 49 605-614, 2017.
    Journal metrics:
    Q2 Biochemistry
    Q1 Clinical Biochemistry
    Q1 Organic Chemistry
  4. Miskei, M., Gregus, A., Sharma, R., Duró, N., Zsólyomi, F., Fuxreiter, M.: Fuzziness enables context dependence of protein interactions.
    FEBS Lett. 591 (17), 2682-2695, 2017.
    Journal metrics:
    Q1 Biochemistry
    D1 Biophysics
    Q2 Cell Biology
    Q1 Genetics
    Q2 Molecular Biology
    Q2 Structural Biology
  5. Thangaraju, K., Király, R., Demény, M., Mótyán, J., Fuxreiter, M., Fésüs, L.: Genomic variants reveal differential evolutionary constraints on human transglutaminases and point towards unrecognized significance of transglutaminase 2.
    PLoS One. 12 (3), 1-24, 2017.
    Journal metrics:
    Q1 Agricultural and Biological Sciences (miscellaneous)
    Q1 Biochemistry, Genetics and Molecular Biology (miscellaneous)
    Q1 Medicine (miscellaneous)
Show all
updated: 2024-03-17, 03:42

SCImago quartiles of
scientific journal articles

Number of scientific articles: 26
Q1/D1 19 (73.1%)
Q1 25 (96.2%)
N/A 1 (3.8%)
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SCImago subject areas and categories

Biochemistry, Genetics and Molecular Biology (21)
Molecular Biology (15)
Biochemistry (7)
Biophysics (7)
Structural Biology (7)
Genetics (5)
Cell Biology (4)
Molecular Medicine (2)
Biochemistry, Genetics and Molecular Biology (miscellaneous) (1)
Clinical Biochemistry (1)
Chemistry (7)
Organic Chemistry (5)
Analytical Chemistry (3)
Physical and Theoretical Chemistry (3)
Inorganic Chemistry (2)
Spectroscopy (2)
Chemistry (miscellaneous) (1)
Medicine (5)
Medicine (miscellaneous) (4)
Cardiology and Cardiovascular Medicine (1)
Agricultural and Biological Sciences (4)
Agricultural and Biological Sciences (miscellaneous) (2)
Ecology, Evolution, Behavior and Systematics (2)
Plant Science (1)
Computer Science (3)
Computer Science Applications (2)
Computational Theory and Mathematics (1)
Multidisciplinary (3)
Multidisciplinary (3)
Chemical Engineering (2)
Catalysis (2)
Environmental Science (1)
Ecology (1)
Mathematics (1)
Modeling and Simulation (1)
Neuroscience (1)
Cellular and Molecular Neuroscience (1)
Pharmacology, Toxicology and Pharmaceutics (1)
Drug Discovery (1)
Pharmaceutical Science (1)

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